Tag: nifti

Workbench Advanced

Workbench Advanced

Today, I am really excited to announce the public release of Workbench Advanced (WBA). WBA is an addition or replacement of the Workbench web applications coming bundled with the Arvados environment and offers multiple advantages over its vanilla counterparts, notably: Speed: At every stage of the development, performance was in […]

NMRate – Browser-based Medical Image Rating System

NMRate – Browser-based Medical Image Rating System

A special order from friends at LREN prompted me to prepare this streamlined version (in fact – a rewrite) of an old tool – crowdseg. crowdseg was never publicly released but was used as part of the works on the following paper: Lorio, S., Fresard, S., Adaszewski, S., Kherif, F., […]

Nifti Review Tool

Nifti Review Tool can be used to prepare thumbnail previews of large numbers of Nifti files. It is aiming to provide some control over the quality of your preprocessing stages as well as prepare figures for the papers. Usage consists of generating a review, then loading it into the GUI, […]